CRISPR-Cas Mediated Genome Editing: A Paradigm Shift towards Sustainable Agriculture and Biotechnology

References (134)

1. 1 RNA-Guided Human Genome Engineering via Cas9 [DOI]
2. 2 Global food demand and the sustainable intensification of agriculture [DOI]
3. 3 Programmable editing of a target base in genomic DNA without double-stranded DNA cleavage [DOI]
4. 4 Programmable base editing of A•T to G•C in genomic DNA without DNA cleavage [DOI]
5. 5 CRISPR-Mediated Modular RNA-Guided Regulation of Transcription in Eukaryotes [DOI]
6. 6 Simultaneous editing of three homoeoalleles in hexaploid bread wheat confers heritable resistance to powdery mildew [DOI]
7. 7 The Molecular Genetics of Crop Domestication [DOI]
8. 8 Targeting DNA Double-Strand Breaks with TAL Effector Nucleases [DOI]
9. 9 Targeted genome modification of crop plants using a CRISPR-Cas system [DOI]
10. 10 A CRISPR/Cas9 toolkit for multiplex genome editing in plants [DOI]
11. 11 Evolution in Action: Plants Resistant to Herbicides [DOI]
12. 12 Boosting CRISPR/Cas9 multiplex editing capability with the endogenous tRNA-processing system [DOI]
13. 13 Multiplex and homologous recombination–mediated genome editing in Arabidopsis and Nicotiana benthamiana using guide RNA and Cas9 [DOI]
14. 14 DNA-free genome editing in plants with preassembled CRISPR-Cas9 ribonucleoproteins [DOI]
15. 15 Engineering Quantitative Trait Variation for Crop Improvement by Genome Editing [DOI]
16. 16 Targeted mutagenesis in the model plant Nicotiana benthamiana using Cas9 RNA-guided endonuclease [DOI]
17. 17 Efficient DNA-free genome editing of bread wheat using CRISPR/Cas9 ribonucleoprotein complexes [DOI]
18. 18 Engineering Complex Synthetic Transcriptional Programs with CRISPR RNA Scaffolds [DOI]
19. 19 Development of broad virus resistance in non‐transgenic cucumber using CRISPR/Cas9 technology [DOI]
20. 20 Precise base editing in rice, wheat and maize with a Cas9-cytidine deaminase fusion [DOI]
21. 21 Targeted base editing in rice and tomato using a CRISPR-Cas9 cytidine deaminase fusion [DOI]
22. 22 Rapid generation of a transgene-free powdery mildew resistant tomato by genome deletion [DOI]
23. 23 A Multipurpose Toolkit to Enable Advanced Genome Engineering in Plants [DOI]
24. 24 A CRISPR/Cas9 Toolbox for Multiplexed Plant Genome Editing and Transcriptional Regulation [DOI]
25. 25 Low‐gluten, nontransgenic wheat engineered with CRISPR/Cas9 [DOI]
26. 26 GW5 acts in the brassinosteroid signalling pathway to regulate grain width and weight in rice [DOI]
27. 27 Engineering Herbicide-Resistant Rice Plants through CRISPR/Cas9-Mediated Homologous Recombination of Acetolactate Synthase [DOI]
28. 28 Generation of High-Amylose Rice through CRISPR/Cas9-Mediated Targeted Mutagenesis of Starch Branching Enzymes [DOI]
29. 29 Efficient Virus-Mediated Genome Editing in Plants Using the CRISPR/Cas9 System [DOI]
30. 30 High‐frequency homologous recombination in plants mediated by zinc‐finger nucleases [DOI]
31. 31 A 4-bp Insertion at ZmPLA1 Encoding a Putative Phospholipase A Generates Haploid Induction in Maize [DOI]
32. 32 Multiplex Gene Editing in Rice Using the CRISPR-Cpf1 System [DOI]
33. 33 Combinatorial metabolic engineering using an orthogonal tri-functional CRISPR system [DOI]
34. 34 Genome-wide Targeted Mutagenesis in Rice Using the CRISPR/Cas9 System [DOI]
35. 35 Orthogonal gene knockout and activation with a catalytically active Cas9 nuclease [DOI]
36. 36 Manipulation of nuclear architecture through CRISPR-mediated chromosomal looping [DOI]
37. 37 A potent Cas9-derived gene activator for plant and mammalian cells [DOI]
38. 38 A geminivirus-based guide RNA delivery system for CRISPR/Cas9 mediated plant genome editing [DOI]
39. 39 Robust Transcriptional Activation in Plants Using Multiplexed CRISPR-Act2.0 and mTALE-Act Systems [DOI]
40. 40 Targeted recombination between homologous chromosomes for precise breeding in tomato [DOI]
41. 41 CRISPR/Cas9‐Based Multiplex Genome Editing in Monocot and Dicot Plants [DOI]
42. 42 New approaches to facilitate rapid domestication of a wild plant to an oilseed crop: Example pennycress (Thlaspi arvense L.) [DOI]
43. 43 Generation of thermosensitive male-sterile maize by targeted knockout of the ZmTMS5 gene [DOI]
44. 44 Genomic structural variation-mediated allelic suppression causes hybrid male sterility in rice [DOI]
45. 45 Pea early-browning virus-mediated genome editing via the CRISPR/Cas9 system in Nicotiana benthamiana and Arabidopsis [DOI]
46. 46 Current and future editing reagent delivery systems for plant genome editing [DOI]
47. 47 Generation of a Collection of Mutant Tomato Lines Using Pooled CRISPR Libraries [DOI]
48. 48 In Planta Processing of the SpCas9–gRNA Complex [DOI]
49. 49 Interspecific Hybrid Sterility in Rice Is Mediated by OgTPR1 at the S1 Locus Encoding a Peptidase-like Protein [DOI]
50. 50 CRISPR/Cas9-mediated resistance to cauliflower mosaic virus [DOI]
51. 51 Search-and-replace genome editing without double-strand breaks or donor DNA [DOI]
52. 52 CRISPR/Cas Genome Editing and Precision Plant Breeding in Agriculture [DOI]
53. 53 Engineered CRISPR-Cas9 nuclease with expanded targeting space [DOI]
54. 54 Broad-spectrum resistance to bacterial blight in rice using genome editing [DOI]
55. 55 De novo domestication of wild tomato using genome editing [DOI]
56. 56 Domestication of wild tomato is accelerated by genome editing [DOI]
57. 57 High aspect ratio nanomaterials enable delivery of functional genetic material without DNA integration in mature plants [DOI]
58. 58 Chloroplast-selective gene delivery and expression in planta using chitosan-complexed single-walled carbon nanotube carriers [DOI]
59. 59 Rapid improvement of domestication traits in an orphan crop by genome editing [DOI]
60. 60 Plant gene editing through de novo induction of meristems [DOI]
61. 61 Expanded base editing in rice and wheat using a Cas9-adenosine deaminase fusion [DOI]
62. 62 A male-expressed rice embryogenic trigger redirected for asexual propagation through seeds [DOI]
63. 63 Efficient C-to-T base editing in plants using a fusion of nCas9 and human APOBEC3A [DOI]
64. 64 Site-specific manipulation of Arabidopsis loci using CRISPR-Cas9 SunTag systems [DOI]
65. 65 De Novo Domestication: An Alternative Route toward New Crops for the Future [DOI]
66. 66 Lycopene Is Enriched in Tomato Fruit by CRISPR/Cas9-Mediated Multiplex Genome Editing [DOI]
67. 67 Genome editing of upstream open reading frames enables translational control in plants [DOI]
68. 68 Clonal seeds from hybrid rice by simultaneous genome engineering of meiosis and fertilization genes [DOI]
69. 69 One-step genome editing of elite crop germplasm during haploid induction [DOI]
70. 70 Generation of herbicide tolerance traits and a new selectable marker in wheat using base editing [DOI]
71. 71 Engineering Broad-Spectrum Bacterial Blight Resistance by Simultaneously Disrupting Variable TALE-Binding Elements of Multiple Susceptibility Genes in Rice [DOI]
72. 72 Precision genome engineering through adenine base editing in plants [DOI]
73. 73 Multiplexed genome engineering by Cas12a and CRISPR arrays encoded on single transcripts [DOI]
74. 74 DNA nanostructures coordinate gene silencing in mature plants [DOI]
75. 75 Mutation of ZmDMP enhances haploid induction in maize [DOI]
76. 76 With a free pass, CRISPR-edited plants reach market in record time [DOI]
77. 77 OsMATL mutation induces haploid seed formation in indica rice [DOI]
78. 78 CRISPR-TSKO: A Technique for Efficient Mutagenesis in Specific Cell Types, Tissues, or Organs in Arabidopsis [DOI]
79. 79 Demonstration of highly efficient dual gRNA CRISPR/Cas9 editing of the homeologous GmFAD2–1A and GmFAD2–1B genes to yield a high oleic, low linoleic and α-linolenic acid phenotype in soybean [DOI]
80. 80 Improved Base Editor for Efficiently Inducing Genetic Variations in Rice with CRISPR/Cas9-Guided Hyperactive hAID Mutant [DOI]
81. 81 Development of a Haploid-Inducer Mediated Genome Editing System for Accelerating Maize Breeding [DOI]
82. 82 Expanding the base editing scope in rice by using Cas9 variants [DOI]
83. 83 CRISPR-Cas13d mediates robust RNA virus interference in plants [DOI]
84. 84 Multiplex QTL editing of grain-related genes improves yield in elite rice varieties [DOI]
85. 85 A barley stripe mosaic virus‐based guide RNA delivery system for targeted mutagenesis in wheat and maize [DOI]
86. 86 Rescue of a plant cytorhabdovirus as versatile expression platforms for planthopper and cereal genomic studies [DOI]
87. 87 CRISPR/Cas-mediated gene targeting in plants: finally a turn for the better for homologous recombination [DOI]
88. 88 CRISPR directed evolution of the spliceosome for resistance to splicing inhibitors [DOI]
89. 89 Engineering Introns to Express RNA Guides for Cas9- and Cpf1-Mediated Multiplex Genome Editing [DOI]
90. 90 Concurrent modifications in the three homeologs of Ms45 gene with CRISPR-Cas9 lead to rapid generation of male sterile bread wheat (Triticum aestivum L.) [DOI]
91. 91 Protein expression and gene editing in monocots using foxtail mosaic virus vectors [DOI]
92. 92 CRISPR/Cas9-mediated multiple gene editing in Brassica oleracea var. capitata using the endogenous tRNA-processing system [DOI]
93. 93 Simplified adenine base editors improve adenine base editing efficiency in rice [DOI]
94. 94 A cytokinin-activation enzyme-like gene improves grain yield under various field conditions in rice [DOI]
95. 95 Conferring DNA virus resistance with high specificity in plants using virus-inducible genome-editing system [DOI]
96. 96 Reversible Disruption of Specific Transcription Factor-DNA Interactions Using CRISPR/Cas9 [DOI]
97. 97 Manipulating mRNA splicing by base editing in plants [DOI]
98. 98 True gene-targeting events by CRISPR/Cas-induced DSB repair of the PPO locus with an ectopically integrated repair template [DOI]
99. 99 Functional Analysis of M-Locus Protein Kinase Revealed a Novel Regulatory Mechanism of Self-Incompatibility in Brassica napus L. [DOI]
100. 100 Generating Photoperiod-Sensitive Genic Male Sterile Rice Lines with CRISPR/Cas9 [DOI]
101. 101 Phage-assisted evolution of an adenine base editor with improved Cas domain compatibility and activity [DOI]
102. 102 Prime genome editing in rice and wheat [DOI]
103. 103 Directed evolution of adenine base editors with increased activity and therapeutic application [DOI]
104. 104 Targeted, random mutagenesis of plant genes with dual cytosine and adenine base editors [DOI]
105. 105 Highly efficient DNA-free plant genome editing using virally delivered CRISPR–Cas9 [DOI]
106. 106 Marker-free carotenoid-enriched rice generated through targeted gene insertion using CRISPR-Cas9 [DOI]
107. 107 Rational Improvement of Rice Yield and Cold Tolerance by Editing the Three Genes OsPIN5b, GS3, and OsMYB30 With the CRISPR–Cas9 System [DOI]
108. 108 Base-Editing-Mediated Artificial Evolution of OsALS1 In Planta to Develop Novel Herbicide-Tolerant Rice Germplasms [DOI]
109. 109 High-Throughput CRISPR/Cas9 Mutagenesis Streamlines Trait Gene Identification in Maize [DOI]
110. 110 Superior field performance of waxy corn engineered using CRISPR–Cas9 [DOI]
111. 111 Development of Plant Prime-Editing Systems for Precise Genome Editing [DOI]
112. 112 Targeted delivery of nanomaterials with chemical cargoes in plants enabled by a biorecognition motif [DOI]
113. 113 A CRISPR way for accelerating improvement of food crops [DOI]
114. 114 CRISPR–Cas9-mediated induction of heritable chromosomal translocations in Arabidopsis [DOI]
115. 115 Quantitative regulation of Waxy expression by CRISPR/Cas9‐based promoter and 5'UTR‐intron editing improves grain quality in rice [DOI]
116. 116 Fine-tuning sugar content in strawberry [DOI]
117. 117 Versatile Nucleotides Substitution in Plant Using an Improved Prime Editing System [DOI]
118. 118 Rationally Designed APOBEC3B Cytosine Base Editors with Improved Specificity [DOI]
119. 119 A DMP-triggered in vivo maternal haploid induction system in the dicotyledonous Arabidopsis [DOI]
120. 120 Optogenetic control of gene expression in plants in the presence of ambient white light [DOI]
121. 121 An inducible genome editing system for plants [DOI]
122. 122 Overcoming bottlenecks in plant gene editing [DOI]
123. 123 A CRISPR‐Cas9‐mediated domain‐specific base‐editing screen enables functional assessment of ACCase variants in rice [DOI]
124. 124 A biotechnology‐based male‐sterility system for hybrid seed production in tomato [DOI]
125. 125 A variety of changes, including CRISPR/Cas9‐mediated deletions, in CENH3 lead to haploid induction on outcrossing [DOI]
126. 126 Roadmap for Accelerated Domestication of an Emerging Perennial Grain Crop [DOI]
127. 127 Precise, predictable multi-nucleotide deletions in rice and wheat using APOBEC–Cas9 [DOI]
128. 128 Generation of homozygous canker‐resistant citrus in the T0 generation using CRISPR‐SpCas9p [DOI]
129. 129 SWISS: multiplexed orthogonal genome editing in plants with a Cas9 nickase and engineered CRISPR RNA scaffolds [DOI]
130. 130 Production of novel beneficial alleles of a rice yield‐related QTL by CRISPR/Cas9 [DOI]
131. 131 Self-processing of ribozyme-flanked RNAs into guide RNAs in vitro and in vivo for CRISPR-mediated genome editing
132. 132 Shortening the sgRNA-DNA interface enables SpCas9 and eSpCas9(1.1) to nick the target DNA strand [DOI]
133. 133 [De novo domestication to create new crops]. [DOI]
134. 134 Efficient Gene Targeting in Maize using Inducible CRISPR-Cas9 and Marker-Free Donor Template [DOI]

Cited by 31

Showing 11 of 31 known citations — external sources report more than can currently be individually listed.

Related research

• Non-invasive Ultra-early in Utero Detection and Precision CRISPR-mediated Correction of Monogenic Embryonic Mutations: A Critical Appraisal of a Hypothetical Therapeutic Framework — shares topic coverage
• Precision Genetic Engineering for Crop Improvement in Modern Agriculture: A Critical Review — shares topic coverage
• Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR)–CRISPR–Cas Systems: Mechanisms, Genome Editing Applications, Therapeutic Potential, and Ethical Considerations — shares topic coverage
• CRISPR-Cas Systems as Synthetic Biology Platforms in Cancer Management: A Critical Appraisal of Programmable Tools, Engineered Circuits and Clinical Evidence — shares topic coverage
• CRISPR-Cas9 Precision Breeding for Climate-resilient Vegetable Crops: A Critical Appraisal of Evidence, Inference and Deployment — shares topic coverage